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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936576.1_cds_XP_016482096.1_73360
CDS Infomation

[gene=LOC107803014] [db_xref=GeneID:107803014] [protein=protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like] [protein_id=XP_016482096.1] [location=join(86903..87132,87527..87884)] [gbkey=CDS]
Sequence

ATGGATTTTGTCACAACACAAGGAAATCTCACTTCAGGTAACAATATGATTCAAGGTACA
AACTTTCTTCCCAACAGTACTACCATCATTCCTTCCTCAGCTCCTCCATTAAGTCGATAC
GAGAACCAGAAACGTCGAGATTGGAACACTTTCTGCCAGTACTTGAGAAATCAACACCCT
CCACTTTCACTTCCTTACTGCAGTGGTGCACATGTCCTGGAATTCCTCAGATACCTGGAC
CAGTTCGGAAAGACCAAAGTCCACAACCAAAATTGTCCATTTTTTGGGCTACAAAATCCT
CCAGCACCTTGTCCTTGCCCTTTAAGGCAAGCTTGGGGAAGTCTTGACGCATTAATTGGT
CGACTTCGAGCTGCATATGAAGAAAATGGTGGAAAGCCAGAAATGAACCCATTTGGAGCT
CGAGCTGTGAGGCTATTTTTACGAGAAGTGAGGGATTTTCAGTCAAAATCTAGAGGGATT
AGCTATGAGAAGAAAAGGAAGAGATCATCCTCAACAAATAAGCAGAAAATAGCAGTGGCT
GCTGCAGGTGCAACTTTATGTGGACAGACAAGTATTAGTAACATTTGA

Peptide Sequence

PEP ID

XP_016482096.1
PEP Infomation

PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Nicotiana tabacum]
Sequence

MDFVTTQGNLTSGNNMIQGTNFLPNSTTIIPSSAPPLSRYENQKRRDWNTFCQYLRNQHP
PLSLPYCSGAHVLEFLRYLDQFGKTKVHNQNCPFFGLQNPPAPCPCPLRQAWGSLDALIG
RLRAAYEENGGKPEMNPFGARAVRLFLREVRDFQSKSRGISYEKKRKRSSSTNKQKIAVA
AAGATLCGQTSISNI

Transcript Sequence

Gene sequence data has not been registered.